Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs62222205 | chr21:30245718 | T/C | 0.000397 | 213 | 17 | 15.07 | 1.17 | KM Plot |
| KIRP | rs62222206 | chr21:30245824 | T/C | 0.000397 | 213 | 17 | 15.07 | 1.17 | KM Plot |
| KIRP | rs62222207 | chr21:30245965 | C/T | 0.000397 | 213 | 17 | 15.07 | 1.17 | KM Plot |
| KIRP | rs62318481 | chr4:76606432 | C/T | 8.0E-5 | 211 | 14.32 | 17.12 | 16.43 | KM Plot |
| KIRP | rs62318482 | chr4:76606463 | G/A | 8.0E-5 | 211 | 14.32 | 17.12 | 16.43 | KM Plot |
| KIRP | rs62318483 | chr4:76606854 | C/T | 8.0E-5 | 211 | 14.32 | 17.12 | 16.43 | KM Plot |
| KIRP | rs62321018 | chr4:76589145 | C/T | 2.87E-5 | 212 | 14.53 | 17.03 | 14.73 | KM Plot |
| KIRP | rs62515259 | chr8:56723007 | G/A | 5.78E-12 | 211 | 16.43 | 16.02 | 5.45 | KM Plot |
| KIRP | rs6426936 | chr1:165684707 | C/T | 0.000157 | 214 | 14.1 | 21.93 | 10.6 | KM Plot |
| KIRP | rs6428489 | chr1:89457930 | C/G | 0.000598 | 203 | 20.15 | 19.35 | 8.73 | KM Plot |
| KIRP | rs6428502 | chr1:89576410 | A/G | 3.27E-5 | 212 | 9.77 | 17.03 | 16.7 | KM Plot |
| KIRP | rs6428525 | chr1:89840623 | C/T | 1.53E-5 | 207 | 4.07 | 16.13 | 16.77 | KM Plot |
| KIRP | rs6457967 | chr6:37002012 | A/G | 4.06E-5 | 214 | 16.47 | 14.02 | 9.77 | KM Plot |
| KIRP | rs6468193 | chr8:30081218 | A/G | 7.88E-7 | 214 | 0.33 | 17 | 16.43 | KM Plot |
| KIRP | rs6468194 | chr8:30081794 | C/T | 7.78E-7 | 211 | 15.2 | 18.47 | 0.2 | KM Plot |